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Publications of the WG Environmental Microbiology

2020

●   Mack, L., Attila, J., Aylagas, E., Beermann, A., Borja, A., Hering, D., Kahlert, M., Leese, F., Lenz, R., Lehtiniemi, M., Liess, A., Lips, U., Mattila, O.-P., Meissner, K.K., Setälä, O., Strehse, J.S., Uusitalo, L., Willstrand Wranne, A., Birk, S. (2020) A synthesis of marine monitoring methods with the potential to enhance the status assessment of the Baltic Sea. Frontiers in Marine Science doi: 10.3389/fmars.2020.552047

●   Tagg, A.S., Sapp, M., Harrison, J.P., Sinclair, C.J., Bradley, E., Ju-Nam, Y., Ojeda, J.J. (2020) Microplastic Monitoring at Different Stages in a Wastewater Treatment Plant Using Reflectance Micro-FTIR Imaging. Frontiers in Environmental Science 8: 145 doi: 10.3389/fenvs.2020.00145

●   Enders, K., Tagg, A.S., Labrenz, M. (2020) Evaluation of Electrostatic Separation of Microplastics From Mineral-Rich Environmental Samples. Frontiers in Environmental Science 8: 112, doi: 10.3389/fenvs.2020.0011

●   Portz, L., Manzolli, R.P., Herrera, G.V., Garcia, L.L., Villate, D.A., Ivar do Sul, J.A. (2020) Marine litter arrived: Distribution and potential sources on an unpopulated atoll in the Seaflower Biosphere Reserve, Caribbean Sea. Marine Pollution Bulletin 157: 11323 https://doi.org/10.1016/j.marpolbul.2020.111323

●   Pinheiro, L.M., Ivar do Sul, J.A., Costa, M.F. (2020) Uptake and ingestion are the main pathways for microplastics to enter marine benthos: A review. Food Webs 24: e00150 https://doi.org/10.1016/j.fooweb.2020.e00150

●   Brandt, J., Bittrich, L., Fischer, F., Kanaki, E., Tagg, A., Lenz, R., Labrenz, M., Brandes, E., Fischer, D., Eichhorn, K. J. (2020) High-Throughput Analyses of Microplastic Samples Using Fourier Transform Infrared and Raman Spectrometry. Applied Spectroscopy, https://doi.org/10.1177/0003702820932926

●   Souza, J.S., Padilha, J.A., Pessoa, A.R.L., Ivar do Sul, J.A., Alves, M.A.S., Lobo‑Hajdu, G., Malm, O., Costa, E.S., Torres, J.P.M. (2020) Trace elements in feathers of Cape Petrel (Daption capense) from Antarctica. Polar Biology 43, 911–917 https://doi.org/10.1007/s00300-020-02683-6

●   Jordan, S.F.A., Treude, T., Leifer, I., Janßen, R., Werner, J., Schulz-Vogt, H., Schmale, O. (2020) Bubble-mediated transport of benthic microorganisms into the water column: Identification of methanotrophs and implication of seepage intensity on transport efficiency. Scientific Reports 10: 4682, https://doi.org/10.1038/s41598-020-61446-9

●   Alneberg, J., C. Bennke, S. Beier, C. Bunse, C. Quince, K. Ininbergs, L. Riemann, M. Ekman, K. Jürgens, M. Labrenz, J. Pinhassi and A. F. Andersson (2020). Ecosystem-wide metagenomic binning enables prediction of ecological niches from genomes. Commun. Biol. 3: 119, doi: 10.1038/s42003-020-0856-x

●   Enders, K., Lenz, R., Ivar do Sul, J.A., Tagg, A.S., Labrenz, M. (2020) When every particle matters: A QuEChERS approach to extract microplastics from environmental samples. MethodsX 7: 100784, doi: 10.1016/j.mex.2020.100784

●   Möller, L., Kreikemeyer, B., Luo, Z-H., Jost, G., Labrenz, M. (2020) Impact of coastal aquaculture operation systems in Hainan island (China) on the relative abundance and community structure of Vibrio in adjacent coastal systems. Estuarine, Coastal and Shelf Science 233: 106542, https://doi.org/10.1016/j.ecss.2019.106542

●   Oberbeckmann, S., Labrenz, M. (2020) Marine microbial assemblages on microplastics: Diversity, adaptation, and role in degradation. Annu. Rev. Mar. Sci. 12: 209-232, doi: 10.1146/annurev-marine-010419-010633

●   Wiegand, S., M. Jogler, C. Boedeker, D. Pinto, J. Vollmers, E. Rivas-Marín, T. Kohn, S. H. Peeters, A. Heuer, P. Rast, S. Oberbeckmann, B. Bunk, O. Jeske, A. Meyerdierks, J. E. Storesund, N. Kallscheuer, S. Lücker, O. M. Lage, T. Pohl, B. J. Merkel, P. Hornburger, R.-W. Müller, F. Brümmer, M. Labrenz, A. M. Spormann, H. J. M. Op den Camp, J. Overmann, R. Amann, M. S. M. Jetten, T. Mascher, M. H. Medema, D. P. Devos, A.-K. Kaster, L. Øvreås, M. Rohde, M. Y. Galperin Jogler, C. (2020) Cultivation and functional characterization of 79 planctomycetes uncovers their unique biology. Nat. Microbiol. 5: 126-140, doi: 10.1038/s41564-019-0588-1

Not peer-reviewed publications 2020:

●   Labrenz, M. (2020) Mikroplastik in aquatischen Systemen: gegenwärtige und (potentielle) zukünftige Belastungen. Schriftenreihe Umweltingenieurwesen Band 95, 19. Dialog Abfallwirtschaft MV S. 471-474

●   Wick, N., Krause, S., Schaum, C., Fischer, F., Fischer, D., Klaeger, F., Labrenz, M. (2020) Herausforderungen bei Probenahme, -aufbereitung und Analyse von Mikroplastik in der kommunalen Abwasserbehandlung. Korrespondenz Abwasser, Abfall. Vol. 67. 2020. Nr. 2, S. 118-124

2019

●   Monteiro, R. C. P., Ivar do Sul, J. A., Costa, M. F. (2019) Small microplastics on beaches of Fernando de Noronha Island, Tropical Atlantic Ocean. Ocean and Coastal Research 2020, v68: e00000

●   Leinfelder, R. and J. Assução Ivar do Sul (2019) The Stratigraphy of plastics and their preservation in geological records. In: The anthropocene as a geological time unit. A guide to the scientific evidence and current debate. Ed. by J. Zalasiewicz, C. N. Waters, M. Williams and C. P. Summerhayes. Cambridge: Cambridge University Press: 147-155, doi: 10.1017/9781108621359

●   Pinheiro, L. M., R. C. P. Monteiro, J. A. Ivar do Sul and M. F. Costa (2019) Do beachrocks affect microplastic deposition on the strandline of sandy beaches? Marine Pollution Bulletin 141: 569-572, doi: 10.1016/j.marpolbul.2019.03.010

●   Janßen, R., Skeff, W., Werner, J., Wirth, M.A., Kreikemeyer, B., Schulz-Bull, D., Labrenz, M. (2019) A Glyphosate Pulse to Brackish Long-Term Microcosms Has a Greater Impact on the Microbial Diversity and Abundance of Planktonic Than of Biofilm Assemblages. Frontiers in Marine Science 6: 758, doi: 10.3389/fmars.2019.00758

●   Enders, K., Käppler, A., Biniasch, O., Feldens, P., Stollberg, N., Lange, X., Fischer, D., Eichhorn, K.-J., Pollehne, F., Oberbeckmann, S., Labrenz, M. (2019) Tracing microplastics in aquatic environments based on sediment analogies. Scientific Reports - Nature 9: 15207, doi: 10.1038/s41598-019-50508-2

●   Janßen, R., Zabel, J., von Lukas, U., Labrenz, M. (2019) An artificial neural network and Random Forest identify glyphosate-impacted brackish communities based on 16S rRNA amplicon MiSeq read counts. Marine Pollution Bulletin 149: 110530, doi.org/10.1016/j.marpolbul.2019.110530

●   Köstner, N., Jürgens, K., Labrenz M., Herndl G. J., Winter, C. (2019) Uneven host cell growth causes lysogenic virus induction in the Baltic Sea. PLOS ONE 14: e0220716, https://doi.org/10.1371/journal.pone.0220716

●   Kesy, K., Oberbeckmann, S., Kreikemeyer, B., Labrenz, M. (2019) Spatial environmental heterogeneity determines young biofilm assemblages on microplastics in the Baltic Sea mesocosms. Front Microbiol, 10: 1665, doi: 10.3389/fmicb.2019.01665

●   Tagg, A.S., Oberbeckmann, S., Fischer D., Kreikemeyer, B., Labrenz, M. (2019) Paint particles are a distinct and variable substrate for marine bacteria. Marine Pollution Bulletin 146: 117-124, https://doi.org/10.1016/j.marpolbul.2019.06.013

●   Tagg, A.S., Ivar do Sul, J.A. (2019) Is this your glitter? An overlooked but potentially environmentally-valuable microplastic. Marine Pollution Bulletin 146: 50-53, doi.org/10.1016/j.marpolbul.2019.05.068

●   Wäge, J., Strassert, J.F.H., Landsberger, A., Loick-Wilde, N., Schmale, O., Stawiarski, B., Kreikemeyer, B., Michel, G., Labrenz, M. (2019) Microcapillary sampling of Baltic Sea copepod gut microbioms indicates high variability between individuals and the potential for methane production. FEMS Microbiol Ecol 95: fiz024, doi: 10.1093/femsec/fiz024

●   Rojas-Jimenez, K., Rieck, A., Wurzbacher, C., Jürgens, K., Labrenz, M., Grossart, H.-P. (2019) A salinity threshold separating fungal communities in the Baltic Sea. Front. Microbiol. 10: 680, doi: 10.3389/fmicb.2019.00680

●   Kettner M.T., Oberbeckmann S., Labrenz M., and Grossart H.-P., (2019) The Eukaryotic Life on Microplastics in Brackish Ecosystems. Front. Microbiol. 10: 538, https://doi.org/10.3389/fmicb.2019.00538

●   Stawiarski, B., Otto, S., Thiel, V., Gräwe, U., Loick-Wilde, N., Wittenborn, A. K., Schloemer, S., Wäge, J., Rehder, G., Labrenz, M., Wasmund N., and Schmale O. (2019) Controls on zooplankton methane production in the central Baltic Sea. Biogeosciences 16: 1-16, doi: 10.5194/bg-16-1-2019

●   Klaeger, F., Tagg, A.S., Otto, S., Bienmüller, M., Sartorius, I., Labrenz, M. (2019) Residual monomer content affects the interpretation of plastic degradation. Scientific Reports - Nature 9: 2120, doi: 10.1038/s41598-019-38685-6

●   Charvet, S., Riemann, L., Alneberg, J., Andersson, A.F., von Borries, J., Fischer, U., Labrenz, M. (2019) AFISsys - an autonomous instrument for the preservation of brackish water samples for microbial metatranscriptome analysis. Water Res. 149: 351-361, doi: 10.1016/j.watres.2018.11.017

●   Möller, L., Laas, P., Rogge, A., Götz, F., Bahlo, R., Leipe, T., Labrenz, M. (2019) Sulfurimonas GD17 cells accumulate polyphosphate under fluctuating redox conditions in the Baltic Sea - possible implications for their ecology. The ISME J. 13: 482-493, https://doi.org/10.1038/s41396-018-0267-x.

2018

●   Waters, C. N., J. Zalasiewicz, C. Summerhayes, I. J. Fairchild, N. L. Rose, N. J. Loader, W. Shotyk, A. Cearreta, M. J. Head, J. P. M. Syvitski, M. Williams, M. Wagreich, A. D. Barnosky, A. Zhisheng, R. Leinfelder, C. Jeandel, A. Gałuszka, J. A. Ivar do Sul, F. Gradstein, W. Steffen, J. R. McNeill, S. Wing, C. Poirier and M. Edgeworth (2018). Global Boundary Stratotype Section and Point (GSSP) for the Anthropocene series: Where and how to look for potential candidates. Earth-Sci. Rev. 178: 379-429, doi: 10.1016/j.earscirev.2017.12.016

●   Ivar do Sul, J.A., Tagg, A.S. & Labrenz, M. (2018) Exploring the common denominator between microplastics and microbiology: a scientometric approach. Scientometrics 117: 2145-2157, https://doi.org/10.1007/s11192-018-2936-y

●   Bergen, B., Naumann, M., Herlemann, D.P.R., Gräwe, U., Labrenz, M., Jürgens, K. (2018) Impact of a major inflow event on the composition and distribution of bacterioplankton communities in the Baltic Sea. Front. Mar. Sci. 5: 383, doi: 10.3389/fmars.2018.00383

●   Monteiro, R. C. P., J. A. Ivar do Sul and M. F. Costa (2018). Plastic pollution in islands of the Atlantic Ocean. Environ. Poll. 238: 103-110, doi: 10.1016/j.envpol.2018.01.096

●   Lenz, R., Labrenz, M. (2018) Small microplastic sampling in water: development of an encapsulated filtration device. Water, 10: 1055; https://doi.org/10.3390/w10081055

●   Alneberg, J., Sundh, J., Bennke, C., Beier, S., Lundin, D., Hugerth, L.W., Pinhassi, J., Kisand, V., Riemann, L., Jürgens, K., Labrenz, M., Andersson, A.F. (2018) BARM and BalticMicrobeDB, a reference metagenome and interface to meta-omic data for the Baltic Sea. Scientific data 5: 180146, doi: 10.1038/sdata.2018.146

●   Käppler, A., Fischer, M., Scholz-Böttcher, B. M., Oberbeckmann, S., Labrenz, M., Fischer, D., Eichhorn, K.-J., Voit, B. (2018) Comparison of µ-ATR-FTIR spectroscopy and py-GCMS as identification tools for microplastic particles and fibers isolated from river sediments. Anal. Bioanal. Che. 410: 5313-5327 https://doi.org/10.1007/s00216-018-1185-5

●   Bennke, C. M., Pollehne, F., Müller, A., Hansen, R., Kreikemeyer, B.,  Labrenz, M. (2018) The distribution of phytoplankton in the Baltic Sea assessed by a prokaryotic 16S rRNA gene primer system. J Plankton Res. 40: 244–254, doi: 10.1093/plankt/fby008
 
●    Oberbeckmann, S., Kreikemeyer, B., Labrenz, M. (2018) Environmental factors support the formation of specific bacterial assemblages on microplastics. Frontiers Microbiol. 8: 2709, doi: 10.3389/fmicb.2017.02709
 
●   Tagg, A. S., Labrenz, M. (2018). Closing microplastic pathways before they open: A model approach. Environ. Sci. Technol. 52: 3340–3341, doi: 10.1021/acs.est.8b00961 (viewpoint paper)
 

●   Schmale, O., Wäge, J., Mohrholz, V., Wasmund, N., Gräwe, U., Rehder, G., Labrenz, M., Loick-Wilde, N. (2018) The contribution of zooplankton to methane supersaturation in the oxygenated upper waters of the central Baltic Sea. Limnol. Oceanogr. 63: 412-430, doi: 10.1002/lno.10640

2017

●    Kettner, M. T., Rojas-Jimenez, K., Oberbeckmann, S., Labrenz, M., Grossart, H.-P. (2017) Microplastics alter composition of fungal communities in aquatic ecosystems. Environ. Microbiol. 19: 4447-4459, doi: 10.1111/1462-2920.13891
 
●    Kesy, K., Hentzsch, A., Klaeger, F., Oberbeckmann, S., Mothes, S., Labrenz, M. (2017) Fate and stability of polyamide-associated bacterial assemblages after their passage through the digestive tract of the blue mussel Mytilus edulis. Mar. Poll. Bull. 125: 132–138 doi: 10.1016/j.marpolbul.2017.08.016
 
●    Köstner, N., Scharnreitner, L., Jürgens, K., Labrenz, M., Herndl, G. J., Winter, C. (2017) High viral abundance as a consequence of low viral decay in the Baltic Sea redoxcline. PLOS ONE 12(6):e0178467, https://doi.org/10.1371/journal.pone.0178467
 
●    Rogge, A., Vogts, A., Voss, M., Jürgens, K., Jost, G., & Labrenz, M. (2017) Success of chemolithoautotrophic SUP05 and Sulfurimonas GD17 cells in pelagic Baltic Sea redox zones is facilitated by their lifestyles as K- and r-strategists. Environ. Microbiol. 19: 2495-2506, doi: 10.1111/1462-2920.13783
 
●    Oberbeckmann, S., K. Kesy, B. Kreikemeyer, Labrenz, M. (2017) Hitchhiking microorganisms on microplastics in the Baltic Sea. In: MICRO 2016: fate and impact of Microplastics in marine ecosystems: from coastline to the open sea. Amsterdam: Elsevier: 72, 978-012-812271-6
 
●    Zettler, M. L., A. Darr, M. Labrenz, S. Sagert, U. Selig, U. Siebert and N. Stybel (2017). Biological indicators. In: Biological oceanography of the Baltic Sea. Ed. by P. Snoeijs-Leijonmalm, H. Schubert and T. Radziejewska. Dordrecht: Springer Science + Business Media: 513-526, 978-94-007-0667-5, doi: 10.1007/978-94-007-0668-2
 
●    Agneta Andersson, Timo Tamminen, Sirpa Lehtinen, Klaus Jürgens, Matthias Labrenz, MarkkuViitasalo (2017). The pelagic food web. In: Biological oceanography of the Baltic Sea. Ed. by P. Snoeijs-Leijonmalm, H. Schubert and T. Radziejewska. Dordrecht: Springer Science + Business Media: 281-332, 978-94-007-0667-5, doi: 10.1007/978-94-007-0668-2
 

2016

●    Bennke, C. M., Reintjes, G., Schattenhofer, M., Ellrott, A., Wulf, J., Zeder, M. & Fuchs, B. M. (2016) Modification of a high-throughput automatic microbial cell enumeration system for shipboard analyses. Appl. Environ. Microbiol. 82: 3289-3296, DOI: 10.1128/AEM.03931-15
 
●    Herlemann, D.P.R., Lundin, D., Andersson, A. F., Labrenz, M., Jürgens (2016) Phylogenetic signals of salinity and season in bacterial community composition across the salinity gradient of the Baltic Sea. Front. Microbiol. 7: 1883, doi: 10.3389/fmicb.2016.01883
 
●    Hu, Y. O. O., Karlson, B., Charvet, S. & Andersson, A. F. (2016) Diversity of pico- to mesoplankton along the 2000 km salinity gradient of the Baltic Sea. Front. Microbiol. 7: 679, doi: 10.3389/fmicb.2016.00679
 
●    Jakobs, G., Labrenz, M., Rehder, G., Hietanen, S., Kießlich, K., Vogts, A., Blumenberg, M. & Schmale, O. (2016) A bioreactor approach to investigate the linkage between methane oxidation and nitrate/nitrite reduction in the pelagic oxic-anoxic transition zone of the central Baltic Sea. Front. Mar. Sci. 3: 145. doi: 10.3389/fmars.2016.00145
 
●    Käppler, A., Fischer, D., Oberbeckmann, S., Schernewski, G., Labrenz, M., Eichhorn, K.-J. & Voit, B. (2016) Analysis of environmental microplastics by vibrational microspectroscopy: FTIR, Raman or both? Anal. Bioanal. Chem. 408: 8377-8391, doi: 10.1007/s00216-016-9956-3
 
●    Kesy, K., Oberbeckmann, S., Müller, F. & Labrenz, M. (2016): Polystyrene influences bacterial assemblages in Arenicola marina-populated aquatic environments in vitro. Environ. Pollut. 219: 219-227, doi: 10.1016/j.envpol.2016.10.032
 
●    Luo, Z.-H., Yu, Y.-P., Jost, G., Liu, W.-H., Huang, X.-L. & Gu, L. (2016) Characterization of two bacteriophages for specific treatment of biofilm formed by a Vibrio sp. isolated from an abalone farm. Aquac. Res. 47: 3964-3972, doi.org/10.1111/are.12846
 
●    Oberbeckmann, S., Osborn, A. M. & Duhaime, M. B. (2016) Microbes on a bottle: Substrate, season and geography influence community composition of microbes colonizing marine plastic debris. PLOS ONE 11: e0159289, doi.org/10.1371/journal.pone.0159289
 

2015

●    Käppler, A., Windrich, F., Löder, M. G. J., Malanin, M., Fischer, D., Labrenz, M., Eichhorn, K.-J. & Voit, B. (2015): Identification of microplastics by FTIR and Raman microscopy: a novel silicon filter substrate opens the important spectral range below 1300 cm−1 for FTIR transmission measurements. Anal. Bioanal. Chem. 407: 6791-6801.
 
●    Kuss, J., Wasmund, N., Nausch, G. & Labrenz, M. (2015): Mercury emission by the Baltic Sea: A consequence of cyanobacterial activity, photochemistry, and low-light mercury transformation. Environ. Sci. Technol. 49: 11449-11457.
 
●    Luo, Z.-H., Yu, Y.-P., Jost, G., Xu, W. & Huang, X.-L. (2015): Complete genome sequence of a giant Vibrio bacteriophage VH7D. Mar. Genomics 24: 293-295.
 
●    Oberbeckmann, S., Löder, M. G. J. & Labrenz, M. (2015): Marine microplastic-associated biofilms – a review. Environ. Chem. 12: 551-562.
 

2014

●   Bergen, B., Herlemann, D. P. R., Labrenz, M. & Jürgens, K. (2014): Distribution of the verrucomicrobial clade Spartobacteria along a salinity gradient in the Baltic Sea. Environ. Microbiol. Rep. 6: 625-630.
 
●   Charvet, S., Vincent, W. F. & Lovejoy, C. (2014): Effects of light and prey availability on Arctic freshwater protist communities examined by high-throughput DNA and RNA sequencing. FEMS Microbiol. Ecol. 88: 550-564.
 
●   Frey, C., Hietanen, S., Jürgens, K., Labrenz, M. & Voss, M. (2014): N and O isotope fractionation in nitrate during chemolithoautotrophic denitrification by Sulfurimonas gotlandica. Environ. Sci. Technol. 48: 13229-13237.
 
●   Glaubitz, S., Abraham, W.-R., Jost, G., Labrenz, M. & Jürgens, K. (2014). Pyruvate utilization by a chemolithoautotrophic epsilonproteobacterial key player of pelagic Baltic Sea redoxclines. FEMS Microbiol. Ecol. 87: 770-779.
 
●   Herlemann, D. P. R., Manecki, M., Meeske, C., Pollehne, F., Labrenz, M., Schulz-Bull, D., Dittmar, T. & Jürgens, K. (2014): Uncoupling of bacterial and terrigenous dissolved organic matter dynamics in decomposition experiments. PLoS ONE 9: e93945.
 
●   Herlemann, D. P. R., Woelk, J., Labrenz, M. & Jürgens, K. (2014): Diversity and abundance of “Pelagibacterales” (SAR11) in the Baltic Sea salinity gradient. System. Appl. Microbiol. 37: 601-604.
 
●   Jakobs, G., Holtermann, P., Berndmeyer, C., Rehder, G., Blumenberg, M., Jost, G., Nausch, G. & Schmale, O. (2014): Seasonal and spatial methane dynamics in the water column of the central Baltic Sea (Gotland Sea). Cont. Shelf Res. 91: 12-25.
 
●   Labrenz, M., Duckat, R., Thorn, M. & Hollaender, K. (2014): Microplastics in the Sea. GAIA 23: 281–283.
 
●   Mammitzsch, K., Jost, G. & Jürgens, K. (2014): Impact of dissolved inorganic carbon concentrations and pH on growth of the chemolithoautotrophic epsilonproteobacterium Sulfurimonas gotlandica GD1T. MicrobiologyOpen 3: 80-88.
 
●   Monier, A., Findlay, H. S., Charvet, S. & Lovejoy, C. (2014): Late winter under ice pelagic microbial communities in the high Arctic Ocean and the impact of short-term exposure to elevated CO2 levels. Front. Microbiol. 5: 490.
 
●   Oberbeckmann, S., Loeder, M. G. J., Gerdts, G. & Osborn, A. M. (2014): Spatial and seasonal variation in diversity and structure of microbial biofilms on marine plastics in Northern European waters. FEMS Microbiol. Ecol. 90: 478-492.
 
●   Salka, I., Wurzbacher, C., Garcia, S. L., Labrenz, M., Jürgens, K. & Grossart, H.-P. (2014): Distribution of acI-Actinorhodopsin genes in Baltic Sea salinity gradients indicates adaptation of facultative freshwater photoheterotrophs to brackish waters. Environ. Microbiol. 16: 586-597.
 

2013

●    Anderson, R., Wylezich, C., Glaubitz, S., Labrenz, M. & Jürgens, K. (2013). Impact of protist grazing on a key bacterial group for biogeochemical cycling in Baltic Sea pelagic oxic / anoxic interfaces. Environ. Microbiol. 15: 1580-1594.
 
●    Berg, C., Labrenz, M., Beckmann, S., Jost, G. & Jürgens, K. (2013): Acetate-utilizing bacteria at an oxic-anoxic interface in the Baltic Sea. FEMS Microb. Ecol. 85: 251-261.
 
●    Bruckner, C. G., Mammitzsch, K., Jost, G., Wendt, J., Labrenz, M. & Jürgens, K. (2013): Chemolithoautotrophic denitrification of epsilonproteobacteria in marine pelagic redox gradients. Environ. Microbiol. 15: 1505-1513.
 
●   Farnelid, H., Bentzon-Tilia, M., Andersson, A. F., Bertilsson, S., Jost, G., Labrenz, M., Jürgens, K. & Riemann, L. (2013). Active nitrogen-fixing heterotrophic bacteria at and below the chemocline of the central Baltic Sea. ISME J. 7: 1413-1423.
 
●    Glaubitz, S., Kießlich, K., Meeske, C., Labrenz, M. & Jürgens, K. (2013). SUP05 dominates the gammaproteobacterial sulfur oxidizer assemblages in pelagic redoxclines of the central Baltic and Black Seas. Appl. Environ. Microbiol. 79:2767-2776.
 
●    Herlemann, D. P. R., Lundin, D., Labrenz, M., Jürgens, K., Zheng, Z., Aspeborg, H. & Andersson, A. F. (2013). Metagenomic de novo assembly of an aquatic representative of the verrucomicrobial class Spartobacteria. mBio 4: e00569-12.
 
●   Jakobs, G., Rehder, G., Jost, G., Kießlich, K., Labrenz, M. & Schmale, O. (2013). Comparative studies of pelagic microbial methane oxidation within the redox zones of the Gotland Deep and Landsort Deep (central Baltic Sea). Biogeosciences 10: 7863-7875.
 
●    Jost, G. & Pollehne, F. (2013): The energetic balance of microbial exploitation of pelagic redox gradients. In: Chemical structure of pelagic redox interface : observation and modeling. Ed. by E. V. Yakushev. Heidelberg: Springer (The Handbook of Environmental Chemistry; 22): 47-65.
 
●    Jost, G. & Wiese, J. (2013). Temporal variations in the concentrations of bacteria and their lytic phages: an example of an indigenous phage host system in Lake Plußsee, Germany. Fund. Appl. Limnol. 182: 183-190.
 
●    Kamyshny, A., Jr., Yakushev, E. V., Jost, G. & Podymov, O. I. (2013): Role of sulfide oxidation intermediates in the redox balance of the oxic–anoxic interface of the Gotland Deep, Baltic Sea. In: Chemical structure of pelagic redox interface : observation and modeling. Ed. by E. V. Yakushev. Heidelberg: Springer (The Handbook of Environmental Chemistry; 22): 95-119.
 
●    Labrenz, M., Grote, J., Mammitzsch, K., Boschker, H. T. S., Laue, M., Jost, G., Glaubitz, S. & Jürgens. K. (2013). Sulfurimonas gotlandica sp. nov., a chemoautotrophic and psychrotolerant epsilonproteobacterium isolated from a pelagic Baltic Sea redoxcline, and an emended description of the genus Sulfurimonas. Int. J. Syst. Evol. Microbiol. 63: 4141-4148
 
●    Yu, Y., Gong, T., Jost, G., Liu, W., Ye, D., Luo, Z.  (2013). Isolation and characterization of five lytic bacteriophages infecting a Vibrio strain closely related to Vibrio owensii. FEMS Microbiol. Lett. 348: 112-119.
 
●    Zettler, M.L., Darr, A., Labrenz, M., Sagert, S., Selig, U., Siebert, U. & Stybel, N. (2013). The indicator value of organisms. In: Snoeijs, P., Schubert, H., Radziejewska, T. (Eds.): Biological Oceanography of the Baltic Sea. Springer,
 

2012

●   Feike, J., Jürgens, K., Hollibaugh, J. T, Krüger, S., Jost, G. & Labrenz, M. (2012): Measuring unbiased metatranscriptomics in pelagic aerobic ammonium oxidation zones of the central Baltic Sea based on a new in situ fixation system. ISME J. 6: 461-470.
 
●    Glöckner F. O., Stal L. J., Sandaa R.-A., Gasol J. M., O’Gara F., Hernandez F., Labrenz M., Stoica E., Varela M. M., Bordalo A. & Pitta P. (2012): Marine microbial diversity and its role in ecosystem functioning and environmental change. Marine Board Position Paper 17. Calewaert, J.B. and McDonough N. (Eds.). Marine Board-ESF, Ostend, Belgium.
 
●    Grote, J., Schott, T., Bruckner, C. G., Glöckner, F. O., Jost, G., Teeling, H., Labrenz, M. & Jürgens, K. (2012): Genome and physiology of a model Epsilonproteobacterium responsible for sulfide detoxification in marine oxygen depletion zones. Proc. Natl. Acad. Sci. USA 109: 506-510.
 
●    Hietanen S., Jäntti H., Buizert C., Jürgens K, Labrenz, M., Voss M. & Kuparinen J. (2012): Hypoxia and nitrogen processing in the Baltic Sea water column. Limnol. Ocenogr. 57: 325-337.
 
●    Jost, G. (2012): A comment to ‘‘The conundrum between chemoautotrophic production and
reductant and oxidant supply: A case study from the Cariaco Basin,’’ published by Li et al. (2012). Deep-Sea Res. I 70: 103-105.
 
●   Schernewski, G., Fischer, E., Huttula, T., Jost, G. & Ras, M. (2012): Simulation tools to support bathing water quality management: Escherichia coli bacteria in a Baltic lagoon. J. Coast. Conserv. 16: 473-488.
 
●    Schmale, O., Blumenberg, M., Kießlich, K., Jakobs, G., Berndmeyer, C., Labrenz, M., Thiel, V. & Rehder, G. (2012): Aerobic methanotrophy within the pelagic redox-zone of the Gotland Deep (central Baltic Sea). Biogeosciences 9: 4969-4977.
 

2011

●    Herlemann, D. P. R., Labrenz, M., Jürgens, K., Bertilsson, S., Waniek, J. J. & Andersson, A. F. (2011): Transitions in bacterial communities along the 2000 km salinity gradient of the Baltic Sea. ISME J. 5: 1571-1579.
 
●    Labrenz, M. & Druschel, G. K. (2011). Zinc. In Encyclopedia of Geobiology (Eds. Joachim Reitner and Volker Thiel). Encyclopedia of Earth Sciences Series 20, 905-908, DOI: 10.1007/978-1-4020-9212-1_214.
 
●   刘斌, (Liu, Bin), Jost, G., Schmiel, J., Wolf, A., 黄翔玲, (Huang, Xiangling ), 谷力, (Gu, Li), 王玉桥, (Wang, Yuqiao)& 叶德赞, (Ye, Dezan) (2011): 源于克雷伯氏菌Klebsiella sp. AC-11的3株噬菌体的生物学特性 (Biological characteristics of 3 lytic bacteriophages from the same host Klebsiella sp. AC-11). 海洋學報 33: 147-154.
 
●   Stolle, C., Labrenz, M., Meeske, C. & Jürgens, K. (2011): Bacterioneuston community structure in the southern Baltic Sea and its dependence on meteorological conditions. Appl. Environ. Microbiol. 77: 3726-3733.
 

2010

●    Glaubitz, S., Labrenz, M., Jost, G. & Jürgens, K. (2010): Diversity of active chemolithoautotrophic prokaryotes in the sulfidic zone of a Black Sea pelagic redoxcline as determined by rRNA-based stable isotope probing. FEMS Microbiol. Ecol. 74: 32-41.
 
●    Jost, G., Martens-Habbena, W., Pollehne, F., Schnetger, B. & Labrenz, M. (2010): Anaerobic sulfur oxidation in the absence of nitrate dominates microbial chemoautotrophy beneath the pelagic chemocline of the eastern Gotland Basin, Baltic Sea. FEMS Microbiol. Ecol. 71: 226-236.
 
●    Labrenz, M., Sintes, E., Toetzke, F., Zumsteg, A., Herndl, G. J., Seidler, M. & Jürgens, K. (2010): Relevance of a crenarchaeotal subcluster related to Candidatus Nitrosopumilus maritimus to ammonia oxidation in the suboxic zone of the central Baltic Sea. ISME J. 4: 1496-1508.
 
●    Stolle, C., Nagel, K., Labrenz, M. & Jürgens, K. (2010): Succession of the sea-surface microlayer in the coastal Baltic Sea under natural and experimentally induced low-wind conditions. Biogeosciences 7: 2975-2988.
 

2009

●    Glaubitz, S., Lueders, T., Abraham, W.-R., Jost, G., Jürgens, K. & Labrenz, M. (2009): 13C-isotope analyses reveal that chemolithoautotrophic Gamma- and Epsilonproteobacteria feed a microbial food web in a pelagic redoxcline of the central Baltic Sea. Environ. Microbiol. 11: 326-337.
 
●    Rodríguez-Martínez, R., Labrenz, M., del Campo, J., Forn, I., Jürgens, K. & Massana, R. (2009): Distribution of the uncultured protist MAST-4 in the Indian Ocean, Drake Passage and Mediterranean Sea assessed by real-time quantitative PCR. Environ. Microbiol. 11: 397-408.
 
●    Stolle, C., Nagel, K., Labrenz, M., Jürgens, K. (2009): Bacterial activity in the sea-surface microlayer: in situ investigations in the Baltic Sea and the influence of sampling devices. Aquat. Microb. Ecol. 58: 67-78.
 

2008

●    Atamna-Ismaeel, N., Sabehi, G., Sharon, I., Witzel, K.-P., Labrenz, M., Jürgens, K., Barkay, T., Stomp, M., Huisman, J. & Beja, O. (2008): Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems. ISME J. 2: 656-662.
 
●    Gasol, J. M., Pinhassi, J., Alonso-Sáez, L., Ducklow, H., Herndl, G. J., Koblízek, M., Labrenz, M., Luo, Y., Morán, X. A. G., Reinthaler, T. & Simon, M. (2008): Towards a better understanding of microbial carbon flux in the sea. Aquat. Microb. Ecol. 53: 21-38
 
●    Grote, J., Jost, G., Labrenz, M., Herndl, G. J. & Jürgens, K. (2008): Epsilonproteobacteria represent the major portion of chemoautotrophic bacteria in sulfidic waters of pelagic redoxclines of the Baltic and Black Seas. Appl. Environ. Microbiol. 74: 7546-7551.
 
●    Jost, G., Zubkov, M. V., Yakushev, E., Labrenz, M. & Jürgens, K. (2008): High abundance and dark CO2 fixation of chemolithoautotrophic prokaryotes in anoxic waters of the Baltic Sea. Limnol. Oceanogr. 53: 14-22.
 
●    Salka, I., Moulisová, V., Koblížek, M., Jost, G., Jürgens, K. & Labrenz, M. (2008): Abundance, depth distribution, and composition of aerobic bacteriochlorophyll a-producing bacteria in four basins of the central Baltic Sea. Appl. Environ. Microbiol. 74: 4398-4404.
 
●    孙佳, (Sun, Jia), 叶德赞, (Ye, Dezan), Kochel, A. & Jost, G. (2008): 裂解性弧菌噬菌体的分离及生理特性 (Isolation and physiological characteristics of lytic bacteriaphages of vibrio). 微生物学报 48: 780-784.

2007

●    Gattinger, A., Höfle, M. G., Schloter, M., Embacher, A., Böhme, F., Munch, J. C. & Labrenz, M. (2007): Traditional cattle manure application determines abundance, diversity and activity of methanogenic Archaea in arable European soil. Environ. Microbiol. 9: 612-624.

●    Grote, J., Labrenz, M., Pfeiffer, B., Jost, G. & Jürgens, K. (2007): Quantitative distributions of Epsilonproteobacteria and a Sulfurimonas subgroup in pelagic redoxclines of the central Baltic Sea. Appl. Environ. Microbiol. 73: 7155-7161.

●    Jost, G., Clement, B., Pakhomova, S. & Yakushev, E. V. (2007): Field studies of anoxic conditions in the Baltic Sea during the cruise of R/V Professor Albrecht Penck in July 2006. Oceanology 47: 590-593.

●    Labrenz, M., Jost, G. & Jürgens, K. (2007) Distribution of abundant prokaryotic organisms in the water column of the central Baltic Sea with an oxic-anoxic interface. Aquat. Microb. Ecol. 46: 177-190.
 
●    Yakushev, E. V., Pollehne, F., Jost, G., Kuznetsov, I., Schneider, B. & Umlauf, L. (2007): Analysis of the water column oxic/anoxic interface in the Black and Baltic seas with a numerical model. Mar. Chem. 107: 388-410.

2006

●    Brettar, I., Labrenz, M., Flavier, S., Bötel, J., Kuosa, H., Christen, R. & Höfle, M. G. (2006): Identification of a Thiomicrospira denitrificans-like epsilonproteobacterium as a catalyst for autotrophic denitrification in the central Baltic Sea. Appl. Environ. Microbiol. 72: 1364-1372.

●    Masín, M., Zdun, A., Ston-Egiert, J., Nausch, M., Labrenz, M., Moulisová, V. & Koblízek, M. (2006): Seasonal changes and diversity of aerobic anoxygenic phototrophs in the Baltic Sea. Aquat. Microb. Ecol. 45: 247-254.

●    Yakushev, E. V., Pollehne, F., Jost, G., Kuznetsov, I., Schneider, B. & Umlauf, L. (2006): Redox Layer Model (ROLM) : a tool for analysis of the water column oxic/anoxic interface processes. Mar. Sci. Reports 68: 1-54.

2005

●    Höfle, M. G., Flavier, S., Christen, R., Bötel, J., Labrenz, M. & Brettar, I. (2005): Retrieval of nearly complete 16S rRNA gene sequences from environmental DNA following 16S rRNA-based community fingerprinting. Environ. Microbiol. 7: 670-675.

●    Labrenz, M., Jost, G., Pohl, C., Beckmann, S., Martens-Habbena, W. & Jürgens, K. (2005): Impact of different in vitro electron donor/acceptor conditions on potential chemolithoautotrophic communities from marine pelagic redoxclines. Appl. Environ. Microbiol. 71: 6664-6672.

●    Labrenz, M., Lawson, P. A., Tindall, B. J., Collins, M. D. & Hirsch, P. (2005): Roseisalinus antarcticus gen. nov., sp. nov., a novel aerobic bacteriochlorophyll a-producing α-proteobacterium isolated from hypersaline Ekho Lake, Antarctica. Int. J. Syst. Evol. Microbiol. 55: 41-47.

2004

●    Labrenz, M. (2004): Living science: Peter Hirsch celebrates his 75th birthday. Microb. Ecol. 47: 197-199.
 
●    Labrenz, M. & Banfield, J. F. (2004): Sulfate-reducing bacteria-dominated biofilms that precipitate ZnS in a subsurface circumneutral-pH mine drainage system. Microb. Ecol. 47: 205-217.

●    Labrenz, M., Brettar, I., Christen, R., Flavier, S., Bötel, J. & Höfle, M. G. (2004): Development and application of a real-time PCR approach for quantification of uncultured bacteria in the central Baltic Sea. Appl. Environ. Microbiol. 70: 4971-4979.

●    Wolf, A., Zheng, T. L., Witzel, K.-P. & Jost, G. (2004): Impact of initial phage/host ratio and nutrient addition on coexistence in a phage-host system. Aquat. Microb. Ecol. 35: 131-139.

2003

●    Labrenz, M., Lawson, P. A., Tindall, B. J., Collins, M. D. & Hirsch, P. (2003): Saccharospirillum impatiens gen. nov., sp nov., a novel γ-Proteobacterium isolated from hypersaline Ekho Lake (East Antarctica). Int. J. Syst. Evol. Microbiol. 53: 653-660.

●    Neretin, L. N., Pohl, C., Jost, G., Leipe, T. & Pollehne, F. (2003): Manganese cycling in the Gotland Deep, Baltic Sea. Mar. Chem. 82: 125-143.

●    Wolf, A., Wiese, J., Jost, G. & Witzel, K.-P. (2003): Wide geographic distribution of bacteriophages that lyse the same indigenous freshwater isolate (Sphingomonas sp. strain B18). Appl. Environ. Microbiol. 69: 2395-2398.

2002

●    Collins, M. D., Lawson, P. A., Labrenz, M., Tindall, B. J., Weiss, N. & Hirsch, P. (2002): Nesterenkonia lacusekhoensis sp. nov., isolated from hypersaline Ekho Lake, East Antarctica, and emended description of the genus Nesterenkonia. Int. J. Syst. Evol. Microbiol. 52: 1145-1150.

●    Druschel, G. K., Labrenz, M., Thomsen-Ebert, T., Fowle, D. A. & Banfield, J. F. (2002): Geochemical Modeling of ZnS in biofilms: An example of ore depositional processes. Econ. Geol. 97: 1319-1329.

2001

●    De Stasio, G., Gilbert, B., Frazer, B. H., Nealson, K. H., Conrad, P. G., Livi, V., Labrenz, M. & Banfield, J. F. (2001): The multidisciplinarity of spectromicroscopy: from geomicrobiology to archaeology. J. Electron. Spectrosc. Relat. Phenom. 114-116: 997-1003.

●    Labrenz, M. & Hirsch, P. (2001): Physiological diversity and adaptations of aerobic heterotrophic bacteria from different depths of hypersaline, heliothermal and meromictic Ekho Lake (East Antarctica). Polar Biol. 24: 320-327.

2000

●    Bothe, H., Jost, G., Schloter, M., Ward, B. B. & Witzel, K.-P. (2000): Molecular analysis of ammonia oxidation and denitrification in natural environments. FEMS Microbiol. Rev. 24: 673-690.

●    Labrenz, M., Druschel, G. K., Thomsen-Ebert, T., Gilbert, B., Welch, S. A., Kemner, K. M., Logan, G. A., Summons, R. E., De Stasio, G., Bond, P. L., Lai, B., Kelly, S. D. & Banfield, J. F. (2000): Formation of sphalerite (ZnS) deposits in natural biofilms of sulfate-reducing bacteria. Science 290: 1744-1747.

●    Labrenz, M., Tindall, B. J., Lawson, P. A., Collins, M. D., Schumann, P. & Hirsch, P. (2000): Staleya guttiformis gen. nov., sp. nov. and Sulfitobacter brevis sp. nov., a-3-Proteobacteria from hypersaline, heliothermal and meromictic Antarctic Ekho Lake. Int. J. Syst. Evol. Microbiol. 50: 303-313.

●    Lawson, P. A., Collins, M. D., Schumann, P., Tindall, B. J., Hirsch, P. & Labrenz, M. (2000): New LL-diaminopimelic acid-containing actinomycetes from hypersaline, heliothermal and meromictic Antarctic Ekho Lake: Nocardioides aquaticus sp. nov. and Friedmanniella lacustris sp. nov. . System. Appl. Microbiol. 23: 219-229.

●    Söller, R., Hirsch, P., Blohm, D. & Labrenz, M. (2000): Differentiation of newly described Antarctic bacterial isolates related to Roseobacter species based on 16S-23S rDNA internal transcribed spacer sequences. Int. J. Syst. Evol. Microbiol. 50: 909-915.

1999 und früher

●    Labrenz, M., Collins, M. D., Lawson, P. A., Tindall, B. J., Schumann, P. & Hirsch, P. (1999): Roseovarius tolerans gen. nov., sp. nov., a budding bacterium with variable bacteriochlorophyll a production from hypersaline Ekho Lake. Int. J. Syst. Bacteriol. 49: 137-147. 
 
●    Labrenz, M., Collins, M. D., Lawson, P. A., Tindall, B. J., Braker, G. & Hirsch, P. (1998): Antarctobacter heliothermus gen. nov., sp. nov., a budding bacterium from hypersaline and heliothermal Ekho Lake. Int. J. Syst. Bacteriol. 48: 1363-1372.
 
●    Jost, G. & Pollehne, F. (1998): Coupling of autotrophic and heterotrophic processes in a Baltic estuarine mixing gradient (Pomeranian Bight). Hydrobiologia 363: 107-115.
 
●    Schiewer, U., Arndt, H., Heerkloss, R., Jost, G., Walter, T. & Wasmund, N. (1996): Experiments with controlled carbon flux variations in shallow brackish waters. Rostock. Meeresbiol. Beitr. 4: 57-65.
 
●    Pollehne, F., Busch, S., Jost, G., Meyer Harms, B., Nausch, M., Reckermann, M., Schaening, P., Setzkorn, D., Wasmund, N. & Witek, Z. (1995): Primary production patterns and heterotrophic use of organic material in the Pomeranian Bay (southern Baltic). Bull. Sea Fish. Inst. Gdynia 136: 43-60.

●    Schiewer, U., Schumann, R., Jost, G. & Sievert, C. (1991): Microbial food web dynamics in tideless eutrophic estuaries of the Baltic Sea. Kiel. Meeresforsch. (Suppl.) 8: 20-28.

●    Schiewer, U. & Jost, G. (1991): The microbial food web in eutrophic shallow estuaries of the Baltic Sea. Int. Rev. gesamt. Hydrobio. 76: 339-350.

●    Jost, G. (1991): Annual changes in some bacteriological parameters of a eutrophic estuary in the Southern Baltic Sea. Kiel. Meeresforsch. (Suppl.) 8: 34-41.
 
●    Schiewer, U., Arndt, H., Jost, G., Heerkloss, R. & Wasmund, N. (1990): Carbon flux dynamics in a shallow eutrophic estuary. Limnologica 20: 95-100.
 
●    Arndt, H., Schiewer, U., Jost, G., Wasmund, N., Walter, T., Heerkloss, R., Arlt, G. & Arndt, E. A. (1990): The importance of pelagic and benthic microfauna in a shallow-water community of the Darss-Zingst Estuary, southern Baltic, during mesocosm experiments. Limnologica 20: 101-106.

●    Arndt, H., Jost, G. & Wasmund, N. (1990): Dynamics of pelagic ciliates in eutrophic estuarine waters: Importance of functional groups among ciliates and responses to bacterial and phytoplankton production. Arch. Hydrobiol. Beih. Ergeb. Limnol. 34: 239-245.
 
●    Jost, G. & Herbst, E. (1988): Estimation of the parameters of heterotrophic potential under conditions of a short turnover time. Arch. Hydrobiol. Beih. Ergeb. Limnol. 31: 79-85.

●    Jost, G. & Ballin, G. (1984): Seasonal changes in bacteriological parameters at a station in the chain of shallow waters (boddens), south of the Darss-Zingst Peninsula (South Baltic). Limnologica 15: 597-603.