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Klaus Jürgens - Publications

  • 2024
    • Leibniz-Forschungsnetzwerk Biodiversität (2024): 10 Must-Knows aus der Biodiversitätsforschung 2024. Thonicke, K., Rahner, E., Arneth, A., Bonn, A., Borchard, N., Chaudhary, A., Darbi, M., Dutta, T., Eberle, U., Eisenhauer, N., Farwig, N., Flocco, C. G., Freitag, J., Grobe, P., Grosch, R., Grossart, H. P., Grosse, A., Grützmacher, K., Hagemann, N., Hansjürgens, B., Hartman Scholz, A., Hassenrück, C., Häuser, C., Hickler, T., Hölker, F., Jacob, U., Jähnig, S., Jürgens, K., Kramer-Schadt, S., Kretsch, C., Krug, C., Lindner, J. P., Loft, L., Mann, C., Matzdorf, B., Mehring, M., Meier, R., Meusemann, K., Müller, D., Nieberg, M., Overmann, J., Peters, R. S., Pörtner, L., Pradhan, P., Prochnow, A., Rduch, V., Reyer, C., Roos, C., Scherber, C., Scheunemann, N., Schroer, S., Schuck, A., Sioen, G. B., Sommer, S., Sommerwerk, N., Tanneberger, F., Tockner, K., van der Voort, H., Veenstra, T., Verburg, P., Voss, M., Warner, B., Wende, W., Wesche, K. Potsdam, Deutschland. 72 Seiten. doi: 10.5281/zenodo.10794362, doi:10.5281/zenodo.10794361
  • 2023
    • Anstett, J., A. M. Plominsky, E. F. DeLong, A. Kiesser, K. Jürgens, C. Morgan-Lang, R. Stepanauskas, F. J. Stewart, O. Ulloa, T. Woyke, R. Malmstrom and S. J. Hallam (2023). A compendium of bacterial and archaeal single-cell amplified genomes from oxygen deficient marine waters. Sci. Data 10: 332, doi: 10.1038/s41597-023-02222-y –open access–
    • Jeppesen, E., T. A. Davidson, M. Meerhoff, L. De Meester, I. González-Bergonzoni, N. Vidal, H. Arndt, K. Jürgens, R. Sommaruga, K. Özkan, T. L. Lauridsen and S. Tserenpil (2023). Differences in food web structure and composition between new and nearby older lakes in West Greenland suggest succession trajectories driven by glacier retreat. Hydrobiologia 850: 4745-4761, doi: 10.1007/s10750-023-05189-4
    • Wittenborn, A. K., T. Bauersachs, C. Hassenrück, K. Käding, J. Wäge-Recchioni, K. Jürgens, H. W. Arz and J. Kaiser (2023). Nitrosopumilus as main source of isoprenoid glycerol dialkyl glycerol tetraether lipids in the central Baltic Sea. Front. Microbiol. 14: 1216130, doi: 10.3389/fmicb.2023.1216130 –open access–
  • 2022
    • Henkel, J. V., H. N. Schulz-Vogt, O. Dellwig, F. Pollehne, T. Schott, C. Meeske, S. Beier and K. Jurgens (2022). Biological manganese-dependent sulfide oxidation impacts elemental gradients in redox-stratified systems: indications from the Black Sea water column. ISME J. 16, 6: 1523-1533, doi: 10.1038/s41396-022-01200-3 –open access–
    • Kuliński, K., G. Rehder, E. Asmala, A. Bartosova, J. Carstensen, B. Gustafsson, P. O. J. Hall, C. Humborg, T. Jilbert, K. Jürgens, H. E. M. Meier, B. Müller-Karulis, M. Naumann, J. E. Olesen, O. Savchuk, A. Schramm, C. P. Slomp, M. Sofiev, A. Sobek, B. Szymczycha and E. Undeman (2022). Biogeochemical functioning of the Baltic Sea. Earth Syst. Dynam. 13: 633-685, doi: 10.5194/esd-13-633-2022 –open access–
    • Piontek, J., C. Meeske, C. Hassenrück, A. Engel and K. Jürgens (2022). Organic matter availability drives the spatial variation in the community composition and activity of Antarctic marine bacterioplankton. Environ. Microbiol. 24: 4030-4048, doi: 10.1111/1462-2920.16087 –open access–
    • Sinninghe Damsté, J. S., L. A. Warden, C. Berg, K. Jürgens and M. Moros (2022). Evaluation of the distributions of hydroxylated glycerol dibiphytanyl glycerol tetraethers (GDGTs) in Holocene Baltic Sea sediments for reconstruction of sea surface temperature: the effect of changing salinity. Clim. Past 18: 2271-2288, doi: 10.5194/cp-18-2271-2022 –open access–
  • 2021
    • Izabel-Shen, D., A.-L. Höger and K. Jürgens (2021). Abundance-occupancy relationships along taxonomic ranks reveal a consistency of niche differentiation in marine bacterioplankton with distinct lifestyles. Front. Microbiol. 12: 690712, doi: 10.3389/fmicb.2021.690712 –open access–
    • Kuliński, K., G. Rehder, E. Asmala, A. Bartosova, J. Carstensen, B. Gustafsson, P. O. J. Hall, C. Humborg, T. Jilbert, K. Jürgens, M. Meier, B. Müller-Karulis, M. Naumann, J. E. Olesen, O. Savchuk, A. Schramm, C. P. Slomp, M. Sofiev, A. Sobek, B. Szymczycha and E. Undeman (2021). Baltic Earth Assessment Report on the biogeochemistry of the Baltic Sea. Earth Syst. Dynam. 2021: 1-93 preprint, doi: 10.5194/esd-2021-33
  • 2020
    • Alneberg, J., C. Bennke, S. Beier, C. Bunse, C. Quince, K. Ininbergs, L. Riemann, M. Ekman, K. Jürgens, M. Labrenz, J. Pinhassi and A. F. Andersson (2020). Ecosystem-wide metagenomic binning enables prediction of ecological niches from genomes. Commun. Biol. 3: 119, doi: 10.1038/s42003-020-0856-x –open access–
    • Kuznecova, J., S. Šulčius, A. Vogts, M. Voss, K. Jürgens and E. Šimoliūnas (2020). Nitrogen flow in diazotrophic cyanobacterium Aphanizomenon flos-aquae is altered by cyanophage infection. Front. Microbiol. 11: 2010, doi: 10.3389/fmicb.2020.02010 –open access–
  • 2019
    • Beier, S., P. Holtermann, D. Numberger, T. Schott, L. Umlauf and K. Jürgens (2019). A metatranscriptomics-based assessment of small-scale mixing of sulfidic and oxic waters on redoxcline prokaryotic communities. Environ. Microbiol. 21: 584-602, doi: doi:10.1111/1462-2920.14499
    • Herlemann, D. P. R., S. Markert, C. Meeske, A. F. Andersson, I. de Bruijn, C. Hentschker, F. Unfried, D. Becher, K. Jürgens and T. Schweder (2019). Individual physiological adaptations enable selected bacterial taxa to prevail during long-term incubations. Appl. Environ. Microbiol. 85: e00825-19, doi: 10.1128/aem.00825-19
    • Köstner, N., K. Jürgens, M. Labrenz, G. J. Herndl and C. Winter (2019). Uneven host cell growth causes lysogenic virus induction in the Baltic Sea. PLoS One 14: e0220716, doi: 10.1371/journal.pone.0220716 –open access–
    • Robinson, T.-B., O. Wurl, E. Bahlmann, K. Jürgens and C. Stolle (2019). Rising bubbles enhance the gelatinous nature of the air-sea interface. Limnol. Oceanogr. 64: 2358-2372, doi: 10.1002/lno.11188 –open access–
    • Rojas-Jimenez, K., A. Rieck, C. Wurzbacher, K. Jürgens, M. Labrenz and H.-P. Grossart (2019). A salinity threshold separating fungal communities in the Baltic Sea. Front. Microbiol. 10: 680, doi: 10.3389/fmicb.2019.00680 –open access–
    • Schulz-Vogt, H. N., F. Pollehne, K. Jürgens, H. W. Arz, S. Beier, R. Bahlo, O. Dellwig, J. V. Henkel, D. P. R. Herlemann, S. Krüger, T. Leipe and T. Schott (2019). Effect of large magnetotactic bacteria with polyphosphate inclusions on the phosphate profile of the suboxic zone in the Black Sea. ISME J. 13: 1198-1208, doi: 10.1038/s41396-018-0315-6
    • Torres-Beltrán, M., A. Mueller, M. Scofield, M. G. Pachiadaki, C. Taylor, K. Tyshchenko, C. Michiels, P. Lam, O. Ulloa, K. Jürgens, J.-H. Hyun, V. P. Edgcomb, S. A. Crowe and S. J. Hallam (2019). Sampling and processing methods impact microbial community structure and potential activity in a seasonally anoxic fjord: Saanich Inlet, British Columbia. Front. Mar. Sci. 6: 132, doi: 10.3389/fmars.2019.00132 –open access–
  • 2018
    • Alneberg, J., J. Sundh, C. Bennke, S. Beier, D. Lundin, L. W. Hugerth, J. Pinhassi, V. Kisand, L. Riemann, K. Jürgens, M. Labrenz and A. F. Andersson (2018). Data Descriptor: BARM and BalticMicrobeDB, a reference metagenome and interface to meta-omic data for the Baltic Sea. Sci. Data 5: 180146, doi: 10.1038/sdata.2018.146 –open access–
    • Bergen, B., M. Naumann, D. P. R. Herlemann, U. Gräwe, M. Labrenz and K. Jürgens (2018). Impact of a Major inflow event on the composition and distribution of bacterioplankton communities in the Baltic Sea. Front. Mar. Sci. 5: 383, doi: 10.3389/fmars.2018.00383 –open access–
    • Jürgens, K. and G. T. Taylor (2018). Microbial ecology and biogeochemistry of oxygen-deficient water columns. In: Microbial Ecology of the Oceans. Ed. by J. M. Gasol and D. L. Kirchman. Third Edition. Hoboken: Wiley: 231-288, 9781119107187
    • Klier, J., O. Dellwig, T. Leipe, K. Jürgens and D. P. R. Herlemann (2018). Benthic bacterial community composition in the oligohaline-marine transition of surface sediments in the Baltic Sea based on rRNA analysis. Front. Microbiol. 9: 236, doi: 10.3389/fmicb.2018.00236 –open access–
    • Scheibner, M. v., D. P. R. Herlemann, A. M. Lewandowska and K. Jürgens (2018). Phyto- and bacterioplankton during early spring conditions in the Baltic Sea and response to short-term experimental warming. Front. Mar. Sci. 5, 231, doi: 10.3389/fmars.2018.00231 –open access–
    • Shen, D., K. Jürgens and S. Beier (2018). Experimental insights into the importance of ecologically dissimilar bacteria to community assembly along a salinity gradient. Environ. Microbiol. 20: 1170-1184, doi: 10.1111/1462-2920.14059
    • Shen, D., S. Langenheder and K. Jürgens (2018). Dispersal modifies the diversity and composition of active bacterial communities in response to a salinity disturbance. Front. Microbiol. 9: 2188, doi: 10.3389/fmicb.2018.02188 –open access–
    • Wylezich, C., D. P. R. Herlemann and K. Jürgens (2018). Improved 18S rDNA amplification protocol for assessing protist diversity in oxygen-deficient marine systems. Aquat. Microb. Ecol. 81: 83-94, doi: 10.3354/ame01864
  • 2017
    • Anderson, R., K. Jürgens and P. J. Hansen (2017). Mixotrophic phytoflagellate bacterivory field measurements strongly biased by standard approaches: A case study. Front. Microbiol. 8: 1398, doi: 10.3389/fmicb.2017.01398 –open access–
    • Andersson, A., T. Tamminen, S. Lehtinen, K. Jürgens, M. Labrenz and M. Viitasalo (2017). The pelagic food web. In: Biological oceanography of the Baltic Sea. Ed. by P. Snoeijs-Leijonmalm, H. Schubert and T. Radziejewska. Dordrecht: Springer Science + Business Media: 281-332, 978-94-007-0667-5, doi: 10.1007/978-94-007-0668-2
    • Beier, S., D. Shen, T. Schott and K. Jürgens (2017). Metatranscriptomic data reveal the effect of different community properties on multifunctional redundancy. Mol. Ecol. 26: 6813-6826, doi: 10.1111/mec.14409
    • Fuchs, A., J. Klier, F. Pinto, G. B. Selmeczy, B. Szabó, J. Padisák, K. Jürgens and P. Casper (2017). Effects of artificial thermocline deepening on sedimentation rates and microbial processes in the sediment. Hydrobiologia 799: 65-81, doi: 10.1007/s10750-017-3202-7
    • Herlemann, D. P. R., M. Manecki, T. Dittmar and K. Jürgens (2017). Differential responses of marine, mesohaline and oligohaline bacterial communities to the addition of terrigenous carbon. Environ. Microbiol. 19: 3098-3117, doi: 10.1111/1462-2920.13784
    • Köstner, N., L. Scharnreitner, K. Jürgens, M. Labrenz, G. J. Herndl and C. Winter (2017). High viral abundance as a consequence of low viral decay in the Baltic Sea redoxcline. PLoS One 12: e0178467, doi: 10.1371/journal.pone.0178467 –open access–
    • Rogge, A., A. Vogts, M. Voss, K. Jürgens, G. Jost and M. Labrenz (2017). Success of chemolithoautotrophic SUP05 and Sulfurimonas GD17 cells in pelagic Baltic Sea redox zones is facilitated by their lifestyles as K- and r-strategists. Environ. Microbiol. 19: 2495-2506, doi: 10.1111/1462-2920.13783
    • Scheibner, M. v., U. Sommer and K. Jürgens (2017). Tight coupling of Glaciecola spp. and diatoms during cold-water phytoplankton spring blooms. Front. Microbiol. 8: 27, doi: 10.3389/fmicb.2017.00027 –open access–
    • Seidel, M., M. Manecki, D. P. R. Herlemann, B. Deutsch, D. Schulz-Bull, K. Jürgens and T. Dittmar (2017). Composition and transformation of dissolved organic matter in the Baltic Sea. Front. Earth Sci. 5: 31, doi: 10.3389/feart.2017.00031 –open access–
    • Weber, F., A. P. Mylnikov, K. Jürgens and C. Wylezich (2017). Culturing heterotrophic protists from the Baltic Sea: mostly the “usual suspects” but a few novelties as well. J. Euk. Microbiol. 64: 153-163, doi: 10.1111/jeu.12347
  • 2016
    • Bergen, B., S. Endres, A. Engel, M. Zark, T. Dittmar, U. Sommer and K. Jürgens (2016). Acidification and warming affect prominent bacteria in two seasonal phytoplankton bloom mesocosms. Environ. Microbiol. 18: 4579-4595, doi: 10.1111/1462-2920.13549
    • Haileselasie, T. H., J. Mergeay, L. J. Weider, R. Sommaruga, T. A. Davidson, M. Meerhoff, H. Arndt, K. Jürgens, E. Jeppesen and L. De Meester (2016). Environment not dispersal limitation drives clonal composition of Arctic Daphnia in a recently deglaciated area. Mol. Ecol. 25: 5830-5842, doi: 10.1111/mec.13843
    • Herlemann, D. P. R., D. Lundin, A. F. Andersson, M. Labrenz and K. Jürgens (2016). Phylogenetic signals of salinity and season in bacterial community composition across the salinity gradient of the Baltic Sea. Front. Microbiol. 7: 1883, doi: 10.3389/fmicb.2016.01883 –open access–
    • Numberger, D., D. P. R. Herlemann, K. Jürgens, G. Dehnhardt and H. Schulz-Vogt (2016). Comparative analysis of the fecal bacterial community of five harbor seals (Phoca vitulina). MicrobiologyOpen 5: 782-792, doi: 10.1002/mbo3.369 –open access–
  • 2015
    • Berg, C., L. Listmann, V. Vandieken, A. Vogts and K. Jürgens (2015). Chemoautotrophic growth of ammonia-oxidizing Thaumarchaeota enriched from a pelagic redox gradient in the Baltic Sea. Front. Microbiol. 5: 786, doi:10.3389/fmicb.2014.00786 –open access–
    • Berg, C., V. Vandieken, B. Thamdrup and K. Jürgens (2015). Significance of archaeal nitrification in hypoxic waters of the Baltic Sea. ISME J. 9: 1319-1332, doi: 10.1038/ismej.2014.218
    • Bergen, B., D. P. R. Herlemann and K. Jürgens (2015). Zonation of bacterioplankton communities along aging upwelled water in the northern Benguela upwelling. Front. Microbiol. 6: 621, doi: 10.3389/fmicb.2015.00621 –open access–
    • Eronen-Rasimus, E., C. Lyra, J.-M. Rintala, K. Jürgens, V. Ikonen and H. Kaartokallio (2015). Ice formation and growth shape bacterial community structure in Baltic Sea drift ice. FEMS Microbiol. Ecol. 91: 1-13, doi: 10.1093/femsec/fiu022
    • Mylnikov, A. P., F. Weber, K. Jürgens and C. Wylezich (2015). Massisteria marina has a sister: Massisteria voersi sp. nov., a rare species isolated from coastal waters of the Baltic Sea. Eur. J. Protistol. 51: 299-310, doi: 10.1016/j.ejop.2015.05.002
    • Orlikowska, A., C. Stolle, F. Pollehne, K. Jürgens and D. E. Schulz-Bull (2015). Dynamics of halocarbons in coastal surface waters during short term mesocosm experiments. Environ. Chem. 12: 515-525, doi: 10.1071/EN14204
    • Rieck, A., D. P. R. Herlemann, K. Jürgens and H.-P. Grossart (2015). Particle-associated differ from free-living bacteria in surface waters of the Baltic Sea. Front. Microbiol. 6: 1297, doi: 10.3389/fmicb.2015.01297 –open access–
  • 2014
    • Bentzon-Tilia, M., H. Farnelid, K. Jürgens and L. Riemann (2014). Cultivation and isolation of N2-fixing bacteria from suboxic waters in the Baltic Sea. FEMS microbiol. ecol. 88: 358-371, doi:10.1111/1574-6941.12304
    • Bergen, B., D. P. R. Herlemann, M. Labrenz and K. Jürgens (2014). Distribution of the verrucomicrobial clade Spartobacteria along a salinity gradient in the Baltic Sea. Environ. microbiol. rep. 6: 625-630, doi:10.1111/1758-2229.12178
    • Frey, C., S. Hietanen, K. Jürgens, M. Labrenz and M. Voss (2014). N and O isotope fractionation in nitrate during chemolithoautotrophic denitrification by Sulfurimonas gotlandica. Environ. sci. technol. 48: 13229-13237, doi:10.1021/es503456g
    • Glaubitz, S., W.-R. Abraham, G. Jost, M. Labrenz and K. Jürgens (2014). Pyruvate utilization by a chemolithoautotrophic epsilonproteobacterial key player of pelagic Baltic Sea redoxclines. FEMS microbiol. ecol. 87: 770-779, doi:10.1111/1574-6941.12263
    • Herlemann, D. P. R., J. Woelk, M. Labrenz and K. Jürgens (2014). Diversity and abundance of “Pelagibacterales” (SAR11) in the Baltic Sea salinity gradient. Syst. appl. microbiol. 37: 601-604, doi:10.1016/j.syapm.2014.09.002 –open access–
    • Herlemann, D. P. R., M. Manecki, C. Meeske, F. Pollehne, M. Labrenz, D. Schulz-Bull, T. Dittmar and K. Jürgens (2014). Uncoupling of bacterial and terrigenous dissolved organic matter dynamics in decomposition experiments. PLoS one 9: e93945, doi:10.1371/journal.pone.0093945 –open access–
    • Mammitzsch, K., G. Jost and K. Jürgens (2014). Impact of dissolved inorganic carbon concentrations and pH on growth of the chemolithoautotrophic epsilonproteobacterium Sulfurimonas gotlandica GD1T. MicrobiologyOpen 3: 80-88, doi:10.1002/mbo3.153 –open access–
    • Salka, I., C. Wurzbacher, S. L. Garcia, M. Labrenz, K. Jürgens and H.-P. Grossart (2014). Distribution of acI-Actinorhodopsin genes in Baltic Sea salinity gradients indicates adaptation of facultative freshwater photoheterotrophs to brackish waters. Environ. microbiol. 16: 586-597, doi:10.1111/1462-2920.12185
    • Scheibner, M. v., P. Dörge, A. Biermann, U. Sommer, H.-G. Hoppe and K. Jürgens (2014). Impact of warming on phyto-bacterioplankton coupling and bacterial community composition in experimental mesocosms. Environ. microbiol. 16: 718-733, doi:10.1111/1462-2920.12195
    • Weber, F., R. Anderson, W. Foissner, A. P. Mylnikov and K. Jürgens (2014). Morphological and molecular approaches reveal highly stratified protist communities along Baltic Sea pelagic redox gradients. Aquat. microb. ecol. 73: 1-16, doi:10.3354/ame01702 –open access–
  • 2013
    • Anderson, R., C. Wylezich, S. Glaubitz, M. Labrenz and K. Jürgens (2013). Impact of protist grazing on a key bacterial group for biogeochemical cycling in Baltic Sea pelagic oxic/anoxic interfaces. Environ. microbiol. 15: 1580-1594, doi:10.1111/1462-2920.12078
    • Berg, C., S. Beckmann, G. Jost, M. Labrenz and K. Jürgens (2013). Acetate-utilizing bacteria at an oxic-anoxic interface in the Baltic Sea. FEMS microbiol. ecol. 85: 251-261, doi:10.1111/1574-6941.12114
    • Bruckner, C. G., K. Mammitzsch, G. Jost, J. Wendt, M. Labrenz and K. Jürgens (2013). Chemolithoautotrophic denitrification of epsilonproteobacteria in marine pelagic redox gradients. Environ. microbiol. 15: 1505-1513, doi:10.1111/j.1462-2920.2012.02880.x
    • Farnelid, H., M. Bentzon-Tilia, A. F. Andersson, S. Bertilsson, G. Jost, M. Labrenz, K. Jürgens and L. Riemann (2013). Active nitrogen-fixing heterotrophic bacteria at and below the chemocline of the central Baltic Sea. ISME j. 7: 1413-1423, doi:10.1038/ismej.2013.26
    • Glaubitz, S., K. Kießlich, C. Meeske, M. Labrenz and K. Jürgens (2013). SUP05 dominates the gammaproteobacterial sulfur oxidizer assemblages in pelagic redoxclines of the central Baltic and Black Seas. Appl. environ. microbiol. 79: 2767-2776, doi:10.1128/aem.03777-12
    • Labrenz, M., J. Grote, K. Mammitzsch, H. T. S. Boschker, M. Laue, G. Jost, S. Glaubitz and K. Jürgens (2013). Sulfurimonas gotlandica sp. nov., a chemoautotrophic and psychrotolerant epsilonproteobacterium isolated from a pelagic redoxcline, and an emended description of the genus Sulfurimonas. Int. j. syst. evol. microbiol. 63: 4141-4148, doi:10.1099/ijs.0.048827-0 –open access–
  • 2012
    • Anderson, R., C. Winter and K. Jürgens (2012). Protist grazing and viral lysis as prokaryotic mortality factors at Baltic Sea oxic-anoxic interfaces. Mar. ecol. prog. ser. 467: 1-14, doi:10.3354/meps10001
    • Feike, J., K. Jürgens, J. T. Hollibaugh, S. Krüger, G. Jost and M. Labrenz (2012). Measuring unbiased metatranscriptomics in suboxic waters of the central Baltic Sea using a new in situ fixation system. ISME j. 6: 461-470, doi:10.1038/ismej.2011.94
    • Grote, J., T. Schott, C. Bruckner, F. O. Glöckner, G. Jost, H. Teeling, M. Labrenz and K. Jürgens (2012). Genome and physiology of a model Epsilonproteobacterium responsible for sulfide detoxification in marine oxygen depletion zones. Proc. Nat. Acad. Sci. U.S.A. 109: 506-510, doi:10.1073/pnas.1111262109
    • Hietanen, S., H. Jäntti, C. Buizert, K. Jürgens, M. Labrenz, M. Voss and J. Kuparinen (2012). Hypoxia and nitrogen processing in the Baltic Sea water column. Limnol. oceanogr. 57: 325-337, doi:10.4319/lo.2012.57.1.0325
    • Lewandowska, A. M., P. Breithaupt, H. Hillebrand, H.-G. Hoppe, K. Jürgens and U. Sommer (2012). Responses of primary productivity to increased temperature and phytoplankton diversity. J. sea res. 72: 87-93, doi:10.1016/j.seares.2011.10.003
    • Weber, F., J. del Campo, C. Wylezich, R. Massana and K. Jürgens (2012). Unveiling trophic functions of uncultured protist taxa by incubation experiments in the brackish Baltic Sea. PLoS one 7: e41970, doi:10.1371/journal.pone.0041970
    • Wey, J. K., K. Jürgens and M. Weitere (2012). Seasonal and successional influences on bacterial community composition exceed that of protozoan grazing in river biofilms. Appl. environ. microbiol. 78: 2013-2024, doi:10.1128/aem.06517-11
    • Wylezich, C., S. Karpov, A. Mylnikov, R. Anderson and K. Jürgens (2012). Ecologically relevant choanoflagellates collected from hypoxic water masses of the Baltic Sea have untypical mitochondrial cristae. BMC microbiol. 12: 271, doi:10.1186/1471-2180-12-271 –open access–
  • 2011
    • Anderson, R., S. Kjelleberg, D. McDougald and K. Jürgens (2011). Species-specific patterns in the vulnerability of carbon-starved bacteria to protist grazing. Aquat. microb. ecol. 64: 105-116, doi:10.3354/ame01518
    • Herlemann, D. P. R., M. Labrenz, K. Jürgens, S. Bertilsson, J. J. Waniek and A. F. Andersson (2011). Transitions in bacterial communities along the 2000 km salinity gradient of the Baltic Sea. ISME j. 5: 1571-1579, doi:10.1038/ismej.2011.41
    • Stolle, C., M. Labrenz, C. Meeske and K. Jürgens (2011). Bacterioneuston community structure in the Southern Baltic Sea and its dependence on meteorological conditions. Appl. environ. microbiol. 77: 3726-3733, doi:10.1128/aem.00042-11
    • Wohlers-Zöllner, J., P. Breithaupt, K. Walther, K. Jürgens and U. Riebesell (2011). Temperature and nutrient stoichiometry interactively modulate organic matter cycling in a pelagic algal-bacterial community. Limnol. oceanogr. 56: 599-610, doi:10.4319/lo.2011.56.2.0599
    • Wylezich, C. and K. Jürgens (2011). Protist diversity in suboxic and sulfidic waters of the Black Sea. Environ. microbiol. 13: 2939-2956, doi:10.1111/j.1462-2920.2011.02569.x
  • 2010
    • Glaubitz, S., M. Labrenz, G. Jost and K. Jürgens (2010). Diversity of active chemolithoautotrophic prokaryotes in the sulfidic zone of a Black Sea pelagic redoxcline as determined by rRNA-based stable isotope probing. FEMS microbiol. ecol. 74: 32-41, doi:10.1111/j.1574-6941.2010.00944.x
    • Labrenz, M., E. Sintes, F. Toetzke, A. Zumsteg, G. J. Herndl, M. Seidler and K. Jürgens (2010). Relevance of a crenarchaeotal subcluster related to Candidatus Nitrosopumilus maritimus to ammonia oxidation in the suboxic zone of the central Baltic Sea. ISME j. 4: 1496-1508, doi:10.1038/ismej.2010.78
    • Stolle, C., K. Nagel, M. Labrenz and K. Jürgens (2010). Succession of the sea-surface microlayer in the coastal Baltic Sea under natural and experimentally induced low-wind conditions. Biogeosciences 7: 2975-2988, doi:doi:10.5194/bg-7-2975-2010
  • 2009
    • Ayo, B., A. Latatu, I. Artolozaga, K. Jürgens and J. Iriberri (2009). Factors affecting preference responses of the freshwater ciliate Uronema nigricans to bacterial prey. J. euk. microbiol. 56: 188-193, doi:10.1111/j.1550-7408.2008.00387.x
    • Deines, P., C. Matz and K. Jürgens (2009). Toxicity of violacein-producing bacteria fed to bacterivorous freshwater plankton. Limnol. oceanogr. 54: 1343-1352
    • Glaubitz, S., T. Lueders, W.-R. Abraham, G. Jost, K. Jürgens and M. Labrenz (2009). 13C-isotope analyses reveal that chemolithoautotrophic Gamma- and Epsilon-proteobacteria feed a microbial food web in a pelagic redoxcline of the central Baltic Sea. Environ. microbiol. 11: 326-337, doi:10.1111/j.1462-2920.2008.01770.x
    • Rodríguez-Martínez, R., M. Labrenz, J. del Campo, I. Forn, K. Jürgens and R. Massana (2009). Distribution of the uncultured protist MAST-4 in the Indian Ocean, Drake Passage and Mediterranean Sea assessed by real-time quantitative PCR. Environ. microbiol. 11: 397-408, doi:10.1111/j.1462-2920.2008.01779.x
    • Stock, A., K. Jürgens, J. Bunge and T. Stoeck (2009). Protistan diversity in the suboxic and anoxic waters of the Gotland Deep (Baltic Sea) as revealed by 18S rRNA clone libraries. Aquat. microb. ecol. 55: 267-284, doi:10.3354/ame01301
    • Stolle, C., K. Nagel, M. Labrenz and K. Jürgens (2009). Bacterial activity in the sea-surface microlayer: in situ investigations in the Baltic Sea and the influence of sampling devices. Aquat. microb. ecol. 58: 67-78, doi:10.3354/ame01351
    • Wohlers, J., A. Engel, E. Zöllner, P. Breithaupt, K. Jürgens, H.-G. Hoppe, U. Sommer and U. Riebesell (2009). Changes in biogenic carbon flow in response to sea surface warming. Proc. Nat. Acad. Sci. U.S.A. 106: 7067-7072, doi:10.1073/pnas.0812743106
    • Zöllner, E., H.-G. Hoppe, U. Sommer and K. Jürgens (2009). Effect of zooplankton-mediated trophic cascades on marine microbial food web components (bacteria, nanoflagellates, ciliates). Limnol. oceanogr. 54: 262-275
  • 2008
    • Atamna-Ismaeel, N., G. Sabehi, I. Sharon, K.-P. Witzel, M. Labrenz, K. Jürgens, T. Barkay, M. Stomp, J. Huisman and O. Beja (2008). Widespread distribution of proteorhodopsins in freshwater and brackish ecosystems. ISME j. 2: 656-662
    • Corno, G. and K. Jürgens (2008). Structural and functional patterns of bacterial communities in response to protist predation along an experimental productivity gradient. Environ. microbiol. 10: 2857-2871
    • Grote, J., G. Jost, M. Labrenz, G. J. Herndl and K. Jürgens (2008). Epsilonproteobacteria represent the major portion of chemoautotrophic bacteria in sulfidic waters of pelagic redoxclines of the Baltic and Black Seas. Appl. environ. microbiol. 74: 7546-7551
    • Hoppe, H.-G., P. Breithaupt, K. Walther, R. Koppe, S. Bleck, U. Sommer and K. Jürgens (2008). Climate warming during winter affects the coupling between phytoplankton and bacteria during the spring bloom: a mesocosm study. Aquat. microb. ecol. 51: 105-115
    • Jost, G., M. V. Zubkov, E. Yakushev, M. Labrenz and K. Jürgens (2008). High abundance and dark CO2 fixation of chemolithoautotrophic prokaryotes in anoxic waters of the Baltic Sea. Limnol. oceanogr. 53: 14-22
    • Jürgens, K. (2008). Mirkobielles Leben in den lebensfeindlichen Tiefen der Ostsee : Mikroorganismen als Katalysatoren wichtiger Stoffkreisläufe. Traditio et innovatio 13: 16-18
    • Jürgens, K. and R. Massana (2008). Protistan grazing on marine bacterioplankton. In: Microbial ecology of the oceans. Ed. by D. L. Kirchman. Hobroken: Wiley-Blackwell: 383-441
    • Montagnes, D. J. S., A. B. Barbosa, J. Boenigk, K. Davidson, K. Jürgens, M. Macek, J. Parry, E. C. Roberts and K. Simek (2008). Selective feeding behaviour of key free-living protists: avenues for continued study. Aquat. microb. ecol. 53: 83-98
    • Salka, I., V. Moulisová, M. Koblížek, G. Jost, K. Jürgens and M. Labrenz (2008). Abundance, depth distribution, and composition of aerobic bacteriochlorophyll a-producing bacteria in four basins of the central Baltic Sea. Appl. environ. microbiol. 74: 4398-4404
    • Vázquez-Domínguez, E., C. M. Duarte, S. Agustí, K. Jürgens, D. Vaqué and J. M. Gasol (2008). Microbial plankton abundance and heterotrophic activity across the Central Atlantic Ocean. Prog. oceanogr. 79: 83-94
  • 2007
    • Falk, S., M. Hannig, C. Gliesche, R. Wardenga, M. Köster, K. Jürgens and G. Braker (2007). nirS-containing denitrifier communities in the water column and sediment of the Baltic Sea. 4: 255-268
    • Grote, J., M. Labrenz, B. Pfeiffer, G. Jost and K. Jürgens (2007). Quantitative distributions of Epsilonproteobacteria and a Sulfurimonas subgroup in pelagic redoxclines of the Central Baltic Sea. Appl. environ. microbiol. 73: 7155-7161
    • Hannig, M., G. Lavik, M. M. M. Kuypers, D. Woebken, W. Martens-Habbena and K. Jürgens (2007). Shift from denitrification to anammox after inflow events in the central Baltic Sea. Limnol. oceanogr. 52: 1336-1345
    • Jeppesen, E., M. Søndergaard, A. R. Pedersen, K. Jürgens, A. Strzelczak, T. L. Lauridsen and L. S. Johansson (2007). Salinity induced regime shift in shallow brackish lagoons. 10: 47-57
    • Labrenz, M., G. Jost and K. Jürgens (2007). Distribution of abundant prokaryotic organisms in the water column of the central Baltic Sea with an oxic-anoxic interface. 46: 177-190
  • 2006
    • Corno, G. and K. Jürgens (2006). Direct and indirect effects of protist predation on population size structure of a bacterial strain with high phenotypic plasticity. Appl. environ. microbiol. 72: 78-86
    • Hannig, M., G. Braker, J. W. Dippner and K. Jürgens (2006). Linking denitrifier community structure and prevalent biogeochemical parameters in the pelagial of the central Baltic Proper (Baltic Sea). FEMS microbiol. ecol. 57: 260-271
    • Jürgens, K. (2006). Predation on bacteria and bacterial resistance mechanisms : comparative aspects among different predator groups in aquatic systems. In: Predatory prokaryotes. Ed. by E. Jurkevitch. Berlin; Heidelberg: Springer (Microbiology monographs ; 4): 57-92
  • 2005
    • Becks, L., F. M. Hilker, H. Malchow, K. Jürgens and H. Arndt (2005). Experimental demonstration of chaos in a microbial food web. 435: 1226-1229
    • Berglund, J., K. Jürgens, I. Bruchmüller, M. Wedin and A. Andersson (2005). Use of group-specific PCR primers for identification of chrysophytes by denaturing gradient gel electrophoresis. Aquat. microb. ecol. 39: 171-182
    • Labrenz, M., G. Jost, C. Pohl, S. Beckmann, W. Martens-Habbena and K. Jürgens (2005). Impact of different in vitro electron donor/acceptor conditions on potential chemolithoautotrophic communities from marine pelagic redoxclines. Appl. environ. microbiol. 71: 6664-6672
    • Matz, C. and K. Jürgens (2005). High motility reduces grazing mortality of planktonic bacteria. Appl. environ. microbiol. 71: 921-929
  • 2004
    • Matz, C., P. Deines, J. Boenigk, H. Arndt, L. Eberl, S. Kjelleberg and K. Jürgens (2004). Impact of violacein-producing bacteria on survival and feeding of bacterivorous nanoflagellates. Appl. environ. microbiol. 70: 1593-1599
    • Pernthaler, J., E. Zöllner, F. Warnecke and K. Jürgens (2004). Bloom of filamentous bacteria in a mesotrophic lake: identity and potential controlling mechanism. Appl. environ. microbiol. 70: 6272-6281
    • Sala, M. M. and K. Jürgens (2004). Bacterial growth on macrophyte leachate in the presence and absence of bacterivorous protists. Arch. Hydrobiol. 161: 371-389
  • 2003
    • Massana, R. and K. Jürgens (2003). Composition and population dynamics of planktonic bacteria and bacterivorous flagellates in seawater chemostat cultures. Aquat. microb. ecol. 32: 11-22
    • Matz, C. and K. Jürgens (2003). Interaction of nutrient limitation and protozoan grazing determines the phenotypic structure of a bacterial community. Microb. ecol. 45: 384-398
    • Sommer, U., F. Sommer, B. Santer, E. Zöllner, K. Jürgens, C. Jamieson, M. Boersma and K. Gocke (2003). Daphnia versus copepod impact on summer phytoplankton: functional compensation at both trophic levels. Oecologia 135: 639-647
    • Zöllner, E., B. Santer, M. Boersma, H.-G. Hoppe and K. Jürgens (2003). Cascading predation effects of Daphnia and copepods on microbial food web components. Freshw. biol. 48: 2174-2193

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